Genetics Intelligent Design

Have we been wrong about DNA bonds all these years?

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For DNA to be read, replicated or repaired, DNA molecules must open themselves. This happens when the cells use a catalytic protein to create a hydrophobic environment around the molecule.​Illustration: Yen Strandqvist

Chalmers U Researches say DNA is held together by hydrophobic forces:

Researchers at Chalmers University of Technology, Sweden, have disproved the prevailing theory of how DNA binds itself. It is not, as is generally believed, hydrogen bonds which bind together the two sides of the DNA structure. Instead, water is the key. The discovery opens doors for new understanding in research in medicine and life sciences. The findings are published in PNAS.

DNA is constructed of two strands consisting of sugar molecules and phosphate groups. Between these two strands are nitrogen bases, the compounds that make up genes, with hydrogen bonds between them. Until now, it was commonly thought that those hydrogen bonds held the two strands together.

But now, researchers from Chalmers University of Technology show that the secret to DNA’s helical structure may be that the molecules have a hydrophobic interior, in an environment consisting mainly of water. The environment is therefore hydrophilic, while the DNA molecules’ nitrogen bases are hydrophobic, pushing away the surrounding water. When hydrophobic units are in a hydrophilic environment, they group together to minimize their exposure to the water.

DNA is held together by hydrophobic forces” at Chalmers University of Technology

Hat tip: Philip Cunningham

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2 Replies to “Have we been wrong about DNA bonds all these years?

  1. 1
    bornagain77 says:

    As to:

    “the secret to DNA’s helical structure may be that the molecules have a hydrophobic interior, in an environment consisting mainly of water.”

    Actually, ‘the secret to DNA’s helical structure’ is more nuanced than that. As the following article states, “If you didn’t have (quantum) entanglement, then DNA would have a simple flat structure, and you would never get the twist that seems to be important to the functioning of DNA,”

    Quantum entanglement holds together life’s blueprint – 2010
    Excerpt: When the researchers analysed the DNA without its helical structure, they found that the electron clouds were not entangled. But when they incorporated DNA’s helical structure into the model, they saw that the electron clouds of each base pair became entangled with those of its neighbours. “If you didn’t have entanglement, then DNA would have a simple flat structure, and you would never get the twist that seems to be important to the functioning of DNA,” says team member Vlatko Vedral of the University of Oxford.
    http://neshealthblog.wordpress.....blueprint/

    And while the finely-tuned, ‘life enabling’, properties of water are problematic enough for anti-design zealots, i.e. for Darwinists, to try to ‘explain away’,,,

    Water’s quantum weirdness makes life possible – October 2011
    Excerpt: WATER’S life-giving properties exist on a knife-edge. It turns out that life as we know it relies on a fortuitous, but incredibly delicate, balance of quantum forces.,,, They found that the hydrogen-oxygen bonds were slightly longer than the deuterium-oxygen ones, which is what you would expect if quantum uncertainty was affecting water’s structure. “No one has ever really measured that before,” says Benmore.
    We are used to the idea that the cosmos’s physical constants are fine-tuned for life. Now it seems water’s quantum forces can be added to this “just right” list.
    http://www.newscientist.com/ar.....sible.html

    Water Is ‘Designer Fluid’ That Helps Proteins Change Shape – 2008
    Excerpt: “When bound to proteins, water molecules participate in a carefully choreographed ballet that permits the proteins to fold into their functional, native states. This delicate dance is essential to life.”
    http://www.sciencedaily.com/re.....113314.htm

    Water, Ultimate Giver of Life, Points to Intelligent Design – (Michael Denton 2017) video
    https://www.youtube.com/watch?v=e2i0g1sL-X4

    Pro-Intelligent Design Peer Reviewed Scientific Paper Argues for an “Engineered World”
    Casey Luskin – December 26, 2010
    Excerpt: “The remarkable properties of water are numerous. Its very high specific heat maintains relatively stable temperatures both in oceans and organisms. As a liquid, its thermal conductivity is four times any other common liquid, which makes it possible for cells to efficiently distribute heat. On the other hand, ice has a low thermal conductivity, making it a good thermal shield in high latitudes. A latent heat of fusion only surpassed by that of ammonia tends to keep water in liquid form and creates a natural thermostat at 0°C. Likewise, the highest latent heat of vaporization of any substance – more than five times the energy required to heat the same amount of water from 0°C-100°C – allows water vapor to store large amounts of heat in the atmosphere. This very high latent heat of vaporization is also vital biologically because at body temperature or above, the only way for a person to dissipate heat is to sweat it off.
    Water’s remarkable capabilities are definitely not only thermal. A high vapor tension allows air to hold more moisture, which enables precipitation. Water’s great surface tension is necessary for good capillary effect for tall plants, and it allows soil to hold more water. Water’s low viscosity makes it possible for blood to flow through small capillaries. A very well documented anomaly is that water expands into the solid state, which keeps ice on the surface of the oceans instead of accumulating on the ocean floor. Possibly the most important trait of water is its unrivaled solvency abilities, which allow it to transport great amounts of minerals to immobile organisms and also hold all of the contents of blood. It is also only mildly reactive, which keeps it from harmfully reacting as it dissolves substances. Recent research has revealed how water acts as an efficient lubricator in many biological systems from snails to human digestion. By itself, water is not very effective in this role, but it works well with certain additives, such as some glycoproteins. The sum of these traits makes water an ideal medium for life. Literally, every property of water is suited for supporting life. It is no wonder why liquid water is the first requirement in the search for extraterrestrial intelligence.
    All these traits are contained in a simple molecule of only three atoms. One of the most difficult tasks for an engineer is to design for multiple criteria at once. … Satisfying all these criteria in one simple design is an engineering marvel. Also, the design process goes very deep since many characteristics would necessarily be changed if one were to alter fundamental physical properties such as the strong nuclear force or the size of the electron.”
    They then explore why the very elements that are most common in life — hydrogen, carbon, and oxygen — are so prevalent in the universe:
    “Hydrogen, oxygen, and carbon rank one, three, and four, respectively, in prevalence in the universe (helium is the other). The explanation has to do with fusion within stars. Early reactions start with hydrogen atoms and then produce deuterium (mass 2), tritium (mass 3), and alpha particles (mass 4), but no stable mass 5 exists. This limits the creation of heavy elements and was considered one of “God’s mistakes” until further investigation. In actuality, the lack of a stable mass 5 necessitates bigger jumps of four which lead to carbon (mass 12) and oxygen (mass 16). Otherwise, the reactions would have climbed right up the periodic table in mass steps of one (until iron, which is the cutoff above which fusion requires energy rather than creating it). The process would have left oxygen and carbon no more abundant than any other element.”
    The authors then quote Fred Hoyle on the subject, who stated, “I do not believe that any scientist who examined the evidence would fail to draw the inference that the laws of nuclear physics have been deliberately designed with regard to the consequences they produce inside the stars.”
    https://evolutionnews.org/2010/12/pro-intelligent_design_peer_re/

    And while the finely-tuned, ‘life enabling’, properties of water are problematic enough for anti-design zealots, i.e. for Darwinists, to try to ‘explain away’, finding quantum entanglement to be ubiquitous within molecular biology is simply devastating to the entire reductive materialistic paradigm of Darwinists:

    “What happens is this classical information (of DNA) is embedded, sandwiched, into the quantum information (of DNA). And most likely this classical information is never accessed because it is inside all the quantum information. You can only access the quantum information or the electron clouds and the protons. So mathematically you can describe that as a quantum/classical state.”
    Elisabeth Rieper – Classical and Quantum Information in DNA – video (Longitudinal Quantum Information resides along the entire length of DNA discussed at the 19:30 minute mark; at 24:00 minute mark Dr Rieper remarks that practically the whole DNA molecule can be viewed as quantum information with classical information embedded within it)
    https://youtu.be/2nqHOnVTxJE?t=1176

    Classical and Quantum Information Channels in Protein Chain – Dj. Koruga, A. Tomi?, Z. Ratkaj, L. Matija – 2006
    Abstract: Investigation of the properties of peptide plane in protein chain from both classical and quantum approach is presented. We calculated interatomic force constants for peptide plane and hydrogen bonds between peptide planes in protein chain. On the basis of force constants, displacements of each atom in peptide plane, and time of action we found that the value of the peptide plane action is close to the Planck constant. This indicates that peptide plane from the energy viewpoint possesses synergetic classical/quantum properties. Consideration of peptide planes in protein chain from information viewpoint also shows that protein chain possesses classical and quantum properties. So, it appears that protein chain behaves as a triple dual system: (1) structural – amino acids and peptide planes, (2) energy – classical and quantum state, and (3) information – classical and quantum coding. Based on experimental facts of protein chain, we proposed from the structure-energy-information viewpoint its synergetic code system.
    http://www.scientific.net/MSF.518.491

    Quantum criticality in a wide range of important biomolecules – Mar. 6, 2015
    Excerpt: “Most of the molecules taking part actively in biochemical processes are tuned exactly to the transition point and are critical conductors,” they say.
    That’s a discovery that is as important as it is unexpected. “These findings suggest an entirely new and universal mechanism of conductance in biology very different from the one used in electrical circuits.”
    The permutations of possible energy levels of biomolecules is huge so the possibility of finding even one (biomolecule) that is in the quantum critical state by accident is mind-bogglingly small and, to all intents and purposes, impossible.,, of the order of 10^-50 of possible small biomolecules and even less for proteins,”,,,
    “what exactly is the advantage that criticality confers?”
    https://medium.com/the-physics-arxiv-blog/the-origin-of-life-and-the-hidden-role-of-quantum-criticality-ca4707924552

  2. 2
    bornagain77 says:

    The reason why finding quantum entanglement to be ubiquitous within molecular biology is simply devastating to the entire reductive materialistic paradigm of Darwinists is because quantum coherence and/or quantum entanglement is a non-local, beyond space and time, effect that requires a beyond space and time cause in order to explain its existence. As the following paper entitled “Looking beyond space and time to cope with quantum theory” stated, ““Our result gives weight to the idea that quantum correlations somehow arise from outside spacetime, in the sense that no story in space and time can describe them,”

    Looking beyond space and time to cope with quantum theory – 29 October 2012
    Excerpt: “Our result gives weight to the idea that quantum correlations somehow arise from outside spacetime, in the sense that no story in space and time can describe them,”
    http://www.quantumlah.org/high.....uences.php

    And as the following article states, “entangled objects do not cause each other to behave the way they do.”

    Quantum correlations do not imply instant causation – August 12, 2016
    Excerpt: A research team led by a Heriot-Watt scientist has shown that the universe is even weirder than had previously been thought.
    In 2015 the universe was officially proven to be weird. After many decades of research, a series of experiments showed that distant, entangled objects can seemingly interact with each other through what Albert Einstein famously dismissed as “Spooky action at a distance”.
    A new experiment by an international team led by Heriot-Watt’s Dr Alessandro Fedrizzi has now found that the universe is even weirder than that: entangled objects do not cause each other to behave the way they do.
    http://phys.org/news/2016-08-q.....ation.html

    Experimental test of nonlocal causality – August 10, 2016
    DISCUSSION
    Previous work on causal explanations beyond local hidden-variable models focused on testing Leggett’s crypto-nonlocality (7, 42, 43), a class of models with a very specific choice of hidden variable that is unrelated to Bell’s local causality (44). In contrast, we make no assumptions on the form of the hidden variable and test all models ,,,
    Our results demonstrate that a causal influence from one measurement outcome to the other, which may be subluminal, superluminal, or even instantaneous, cannot explain the observed correlations.,,,
    http://advances.sciencemag.org.....00162.full

    Moreover, as the following study found, the greater the number of particles in a quantum hypergraph state, (which is exactly the type of quantum coherence that we have with protein and DNA molecules), the more strongly it violates local realism, with the strength increasing exponentially with the number of particles.

    Physicists find extreme violation of local realism in quantum hypergraph states – Lisa Zyga – March 4, 2016
    Excerpt: Many quantum technologies rely on quantum states that violate local realism, which means that they either violate locality (such as when entangled particles influence each other from far away) or realism (the assumption that quantum states have well-defined properties, independent of measurement), or possibly both. Violation of local realism is one of the many counterintuitive, yet experimentally supported, characteristics of the quantum world.
    Determining whether or not multiparticle quantum states violate local realism can be challenging. Now in a new paper, physicists have shown that a large family of multiparticle quantum states called hypergraph states violates local realism in many ways. The results suggest that these states may serve as useful resources for quantum technologies, such as quantum computers and detecting gravitational waves.,,,
    The physicists also showed that the greater the number of particles in a quantum hypergraph state, the more strongly it violates local realism, with the strength increasing exponentially with the number of particles. In addition, even if a quantum hypergraph state loses one of its particles, it continues to violate local realism. This robustness to particle loss is in stark contrast to other types of quantum states, which no longer violate local realism if they lose a particle. This property is particularly appealing for applications, since it might allow for more noise in experiments.
    http://phys.org/news/2016-03-p.....alism.html

    Darwinists, with their reductive materialistic framework, simply have no beyond space and time cause that they can appeal so as to be able to explain the non-local quantum coherence and/or entanglement of the cell. Whereas Christians readily do have a beyond space and time cause that they can appeal to. As Colossians 1:17 states, “He is before all things, and in him all things hold together.”

    Colossians 1:17
    He is before all things, and in him all things hold together.

    It is also important to note that quantum information is conserved. As the following article states, In the classical world, information can be copied and deleted at will. In the quantum world, however, the conservation of quantum information means that information cannot be created nor destroyed.

    Quantum no-hiding theorem experimentally confirmed for first time – 2011
    Excerpt: In the classical world, information can be copied and deleted at will. In the quantum world, however, the conservation of quantum information means that information cannot be created nor destroyed. This concept stems from two fundamental theorems of quantum mechanics: the no-cloning theorem and the no-deleting theorem. A third and related theorem, called the no-hiding theorem, addresses information loss in the quantum world. According to the no-hiding theorem, if information is missing from one system (which may happen when the system interacts with the environment), then the information is simply residing somewhere else in the Universe; in other words, the missing information cannot be hidden in the correlations between a system and its environment.
    http://www.physorg.com/news/20.....tally.html

    The implication of finding ‘non-local’, beyond space and time, and ‘conserved’, quantum information in molecular biology on such a massive scale, in every important biomolecule in our bodies, is fairly, and pleasantly, obvious.
    That pleasant implication, of course, being the fact that we now have very strong empirical evidence suggesting that we do indeed have an eternal soul that is capable of living beyond the death of our material bodies. As Stuart Hameroff states in the following video, the quantum information,,, isn’t destroyed. It can’t be destroyed.,,, it’s possible that this quantum information can exist outside the body. Perhaps indefinitely as a soul.”

    Leading Scientists Say Consciousness Cannot Die It Goes Back To The Universe – Oct. 19, 2017 – Spiritual
    Excerpt: “Let’s say the heart stops beating. The blood stops flowing. The microtubules lose their quantum state. But the quantum information, which is in the microtubules, isn’t destroyed. It can’t be destroyed. It just distributes and dissipates to the universe at large. If a patient is resuscitated, revived, this quantum information can go back into the microtubules and the patient says, “I had a near death experience. I saw a white light. I saw a tunnel. I saw my dead relatives.,,” Now if they’re not revived and the patient dies, then it’s possible that this quantum information can exist outside the body. Perhaps indefinitely as a soul.”
    – Stuart Hameroff – Quantum Entangled Consciousness – Life After Death – video (5:00 minute mark)
    https://www.disclose.tv/leading-scientists-say-consciousness-cannot-die-it-goes-back-to-the-universe-315604

    Verse:

    Mark 8:37
    Is anything worth more than your soul?

    Supplemental note:

    Darwinian Materialism vs. Quantum Biology – Part II – video
    https://www.youtube.com/watch?v=oSig2CsjKbg

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