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Ken Miller, the honest Darwinist

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Ken Miller just published a review of Michael Behe’s book, Edge of Evolution. Here is Miller at his best:

but Behe has built his entire thesis on this error. Telling his readers that the production of so much as a single new protein-to-protein binding site is “beyond the edge of evolution”, he proclaims darwinian evolution to be a hopeless failure. Apparently he has not followed recent studies exploring the evolution of hormone-receptor complexes by sequential mutations (Science 312, 97–101; 2006),

Ken Miller
Falling over the edge

Miller falsely accuses Behe of not following the Science (2006) paper, yet it’s hard to imagine that Miller missed the widely available public response by Behe of that very study. How could Miller accuse Behe of not following the study, when Behe said:

The study by Bridgham et al (2006) published in the April 7 issue of Science is the lamest attempt yet — and perhaps the lamest attempt that’s even possible — to deflect the problem that irreducible complexity poses for Darwinism
….

The fact that such very modest results are ballyhooed owes more, I strongly suspect, to the antipathy that many scientists feel toward ID than to the intrinsic value of the experiment itself.

In conclusion, the results (and even the imagined-but-problematic scenario) are well within what an ID proponent already would think Darwinian processes could do, so they won’t affect our evaluation of the science. But it’s nice to know that Science magazine is thinking about us!

Michael Behe
The Lamest Attempt Yet to Answer the Challenge Irreducible Complexity,

Despite Behe’s public and widely available commentary on this study, Miller falsely accuses Behe of not following it. Miller asserts boldly, “Apparently he [Behe] has not followed recent studies exploring the evolution of hormone-receptor complexes by sequential mutations (Science 312, 97–101; 2006)“.

I get it, Miller didn’t realize Behe has indeed followed this study and that Behe has even publicly commented on the Discovery Institute’s website. Miller couldn’t possibly have been so dastardly as to actually know Behe published responses to the study, and then falsely accuse Behe of not following the study.

Miller couldn’t possibly be that dastardly. We can therefore attribute it to Miller’s ignorance and simply presume, even though Miller has been obsessed by ID activities, he missed Behe response on the DI website. That can only be the explanation since Miller, being the honest Darwinist he is, can’t possibly do such a dastardly thing. We must chalk this up to his honest ignorance.

[UPDATE:

I found more examples of Ken’s Honesty:

1. Miller falsely insinuates Behe waves away “evidence”

2. Miller’s case against a non-220 CQRs self-destructs by the very paper he cites against Behe

3. Ken Miller needs to know 2004 does not equal 2005

4. Ken Miller reapeats the same misrepresentation he made under oath in Dover

]

Notes:

1. Ken Miller is the guy who has taken various bruisings from scientific evidence and continues his misrepresentations and story telling as he did under oath in the Dover trial. [See: Ken Miller may face more embarrassing facts, Behe’s DBB vindicated and Ken Miller caught making factually incorrect statements under oath]

2. Miller has not (to my knowledge) retracted yet another misrepresentation he made of Behe some time back.

Mike Gene observes in 9+2 = Straw:

In his book, Finding Darwin’s God, Miller finds himself “amused” at Behe’s argument regarding the eukaryotic flagellum, adding, “A phone call to any biologist who had ever actually studied cilia and flagella would have told Behe that he’s wrong in his contention that the 9+2 structure is the only way to make a working cilium or flagellum.” (p.141).
….
But I can’t find where Behe ever raised this contention.
….
what is annoying is that Miller uses this misrepresentation as part of a carefully crafted ad hominem. He begins with “amusement” that leads up to his “A phone call to any biologist” schtick.

Mike Gene

Comments
The problem with the Super Monkey Ball agrument is pretty obvious. But it is still a favorite of the Darwinian faithful.
What I find interesting, is that this argument was not used by any of the major reviewers of Behe's book, as far as I know. It is just popular among Darwin's internet fansIDist
June 28, 2007
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Another common criticism of I see of Behe is that he does not account for dynamic fitness landscapes. This is the Super Monkey Ball argument. According to this argument, a dynamic fitness landscape helps guide a gene through sequential mutations to eventual complexity by preventing the gene from getting stuck at a local maximum. This works exactly like Super Monkey Ball where a tilting landscape guides a monkey in a ball through a maze to an eventual goal. The problem with the Super Monkey Ball agrument is pretty obvious. But it is still a favorite of the Darwinian faithful.Jehu
June 28, 2007
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Miller writes,
Behe obtains his probabilities by considering each mutation as an independent event, ruling out any role for cumulative selection, and requiring evolution to achieve an exact, predetermined result.
This is a common theme criticizing Behe - Behe ignores the possibility of cumulative selection. Sean Carroll made the same claim. But is it true? No it is not. In The Edge of Evolution Behe spends some time discussing examples of cumulative selection. For example, Behe actually spends more than a full page discussing pyrimethamine resistance by cumulative selection. Here is quote, "Although the first mutation (at position 108 of the protein, as it happens) grants some resistance to the drug, the malaria is still vulnerable to larger doses. Adding more mutations (at positions 51, 59, and a few others) can increase the level of resistance." Explaining how he covered cumalative selection, Behe writes in his Amazon blog, "I discuss gradual evolution of antifreeze resistance, resistance to some insecticides by “tiny, incremental steps — amino acid by amino acid — leading from one biological level to another”, hemoglobin C-Harlem, and other examples, in order to make the critically important distinction between beneficial intermediate mutations and detrimental intermediate ones." So the ignoring cumulative selection argument is a complete strawman. Behe's position is that the creative power of cumulative selection is extremely limited and he backs up this position with real world examples of astronomical populations getting very limited results with it. This is something the critcis don't really address.Jehu
June 28, 2007
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For the record, Miller may have been thinking of this when he discussed CQRs without the 220 mutation Origin and Dissemination of Chloroquine-Resistant Plasmodium falciparum with Mutant pfcrt Alleles in the Philippines :
Palawan, though separated by sea, shares a closely related dominant pfcrt allelic type with Central Luzon. The novel mutations in P2a and P2b alleles (A144T and L160Y) were not found in a wild-type pfcrt gene, indicating that these mutations in the CQR isolates were not inherited from chloroquine-susceptible parasites in the Philippines. In addition, none of the Philippine isolates with A144T and L160Y mutations (n = 48) carried the A220S mutation very commonly seen in CQR parasites elsewhere. The mutually exclusive presence of A144T/L160Y with A220S suggests that A144T and L160Y may play a similar role as A220S in CQR.
But it would be hard to argue that this supports Miller's point since instead of a mutation at a single position of A220S we are dealing with two! A144T/L160Yscordova
June 28, 2007
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"I just wish that these journals give Behe the opportunity to respond, but this is almost impossible." Is that impossible? Isn't there some way to insist that Behe get a chance to respond to all the falsehoods and rhetoric being relayed in the numerous reviews of his book?Forthekids
June 28, 2007
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Mung wrote: Sal, you should have been quoting me rather than Mike Gene, as I have priority on pointing out Miller’s blatant falsehoods.
I'd be happy to publish your colleciton on my website. Is there a way I can get a hold of it? Salscordova
June 28, 2007
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One of the problems is that there is no place where there is a clearinghouse for information on all the aspects of the debate, not just on Ken Miller per se.
It's in the works. I'll have a spot for "honest" Ken Miller and Richard "sweetness" Dawkins.scordova
June 28, 2007
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Miller and his comdrades in arms all defend evolution with the basic mentality of "the ends justify the means". It's really that simple. It's a glaringly obvious ethical scandal to any and all people who see how they operate and know where and when they utilize hyperbole, lies, etc, as examples of truisms. I wonder if they know they have no integrity or if they have a psychological condition which causes them to see what they do as being honest. Either way it just shows how pathetically the so-called enlightened are in reality wallowing in the mire while shouting to one all that they are dancing on the ceiling to the tune of the truth the light and the way. They build their maze of lies in the hopes of destroying people's faith in their perceived enemy, in actual reality their real enemy is their arrogance and small mindedness. Their mad maze of lies only ends up keeping all who enter it hopelessly lost.mentok
June 28, 2007
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The problem here is that you are preaching to the choir. You need to catagorize these errors/bluffs to persuade anyone. A website would be a great idea except it calls for time and might end with being blackballed by the scientific community. Any way, kudos to the op.bork
June 28, 2007
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Mike1962, One of the problems is that there is no place where there is a clearinghouse for information on all the aspects of the debate, not just on Ken Miller per se. It is all in bits and pieces. The other side is better organized and better funded. I suggested the other day that a webpage be developed that would point out all the flaws on the COE postion paper on conflating creationism with ID. It would be easy, just compare what the COE said and what the truth is. I doubt anyone would do it but it would take about a day to do that particular project. How about hiring a summer intern at the Discovery Institute. Maybe when I retire, I will do something but I am sure that like me all of us are too busy with life to do this. What we need is a wikipedia for evolution, but an honest one.jerry
June 28, 2007
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Miller is not interested in the science, he is only interested in making money by selling books to rubes.rrf
June 28, 2007
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Is there a website or page that has a compendium of all the errors and misrepresentations of Miller and the rest to which I could point people who enquire? If not, it would be a good project for someone.mike1962
June 28, 2007
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"Don’t be too hard on Ken. He has a lot invested in the darwinian paradigm" My guess is that Ken Miller has a large financial stake in the outcome. He makes a couple hundred thousand dollars a year off Darwinism. Others do too. It is a growth industry on both sides. Follow the Money!jerry
June 28, 2007
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Don't be too hard on Ken. He has a lot invested in the darwinian paradigm and has based a lot of his theology on it I suspect, so like the atheists he has a definite religious stake in the outcome. If he is deliberately misrepresenting Mike then he is probably doing so because he sees him as a threat, but in reality he is probably not intentionlly doing it, it is just that the work of Mike's sets off alarm bells that threatens Ken's theology and this impairs his reading comprehension because he sees it all through a "this is a threat to my theology" lense, like many of the atheists who get so upset. So cut the guy some slack and give him the benifit of the doubt. You are asking a lot from him to change his mind on this issue and it may not be possible for him to. He is simply suffering from Mortons Demon.Jason Rennie
June 28, 2007
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I still have to pick up Behe's book, though I wouldn't go so far as to question Miller's christianity. Admittedly, I'd love to see him turn his guns more on Dawkins and the like, who I see as fanning the 'evolution is atheism!' flames. I wish the people in these debates could discuss things in calmer, more relaxed ways. If they disagree with Behe, why be so smug an animated about it? Likewise for people who disagree with Miller. But, that's hard to manage nowadays. Either way, interesting to see this review's gotten such things wrong.nullasalus
June 28, 2007
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I really like your posts Sal. But the problem is that no matter how many errors, distortions, misrepresentations, misquotes or misunderstandings of Behe's work in the reviews by the darwinist elite, the reviews will be endelessly cited as refuted Behe. After all, these are published in Nature and Science etc. In fact, Richard Dawkins in his pathetic review cites Coyne's as "devastating". I just wish that these journals give Behe the opportunity to respond, but this is almost impossible :(IDist
June 28, 2007
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In this work he claimed that complex biochemical systems have a property he called "irreducible complexity". Irreducibly complex structures, such as the bacterial flagellum, could not have evolved because they lack any selectable function until all of their component parts are in place. As he wrote, "any precursor to an irreducibly complex system is by definition nonfunctional", since every part of such a system had to be in place for natural selection to favour it. Ken Miller
But this is a strawman, as Casey Luskin pointed out on the Discovery Institute website: Response to Ken Miller & Judge Jones's Straw Tests
“Drs. Miller and Padian testified that Professor Behe’s concept of irreducible complexity depends on ignoring ways in which evolution is known to occur. .... Professor Behe excludes, by definition, the possibility that a precursor to the bacterial flagellum functioned not as a rotary motor, but in some other way... The ACLU speaking through Judge John E. Jones
Ah yes, Judge Jones bought the misrepresentation honest Ken gave under oath in Dover 2005, and honest Ken repeats it in the Nature review, but what Behe says shows that Miller is misrepresenting him:
Because the cilium is irreducibly complex, no direct gradual route leads to its production. So an evolutionary story for the cilium must envision a circuitous route, perhaps adapting parts that were originally used for other purposes.
This clearly shows Miller misrpresented Behe. Furthermore, it appears Miller hasn't been reading any of the ID press releases pointing this out. Golly, Miller's friends haven't been very good at sending e-mails to Miller to alert him of DI press releases with his name on it like Response to Ken Miller which point out his misrepresentations. So that's why honest Ken continues to repeat the misrepresentation in the prestigious scientific journal Nature (the same as he did in Dover under oath) after he has had the opportunity to correct his mistake for almost 2 years now. Even repeated it on camera in a debate with Paul Nelson, after Nelson told him in person at AEI in 2005, that Miller was misrepresenting Behe. Miller's so dense! Honest Ken is not dastardly, he would surely stop this misrepresentation once he was aware of his mistake. Rather, the reason he does what he does, even under oath in a major trial, is that he's comprehensionally challenged and dense. He's not dastardly in any way. No, not a chance.scordova
June 27, 2007
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Ken Miller even mis-cites a paper:
(Nature Genet. 37, 73–76; 2005)
Actually it was:
(Nature Genet. 37, 73–76; 2004) The 'evolvability' of promiscuous protein functions
But this is more proof "honest" Ken is just sloppy and not dastardly. PS this paper that Miller References was also referenced in this peer-reviewed paper The intelligent design of evolution which stated
The debate between intelligent design and evolution in education may still rage in school boards and classrooms, but intelligent design is making headway in the laboratory. ..... Intelligent design, however, may be here to stay.
scordova
June 27, 2007
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Sal, you should have been quoting me rather than Mike Gene, as I have priority on pointing out Miller's blatant falsehoods. His ignorance can only rightfully be viwed as willfull, and his mirepresentations as deliberate. Ever since I readi Finding Darwin's God I have doubted that he is a Christian, and not without reason.Mung
June 27, 2007
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Miller states without proof whatsoever: First, he overlooks the existence of chloroquine-resistant strains of malaria lacking one of the mutations he claims to be essential (at position 220).
Did Miller forget this study? P. falciparum Digestive Vacuole Transmembrane Protein PfCRT and Evidence for Their Role in Chloroquine Resistance
All Old and New World pfcrt alleles in CQR parasites consistently include mutations for K76T and A220S
or even in the paper Miller cites and accuses Behe of waving off:
mutations K76T and Ala220 Ser (A220S) appear to be the most reliable markers predicting CQ resistance.
and the final nail in Miller's argument:
There are three plausible explanations for this: (i) If the mutations can be acquired in any sequence and K76T and A220S have large effects, then they will have a stronger correlation with resistance; the problem with this argument is that they [76 and 220] rarely, if ever, occur alone
PS For the situation where 220 is missing but we still find CQR, see comment on A144T/L160Y Behe was astute to note "the problem with this [sequentially selective argument] is that they rarely, if ever, occur alone". In other words, honest Ken is not a dastardly guy afterall, just comprehensionally challenged.scordova
June 27, 2007
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//off topic It seems that all the big names in the darwinist camp will be commenting on Behe's book next month. and here is the first (Richard Dawkins no less) http://select.nytimes.com/preview/2007/07/01/books/1154680128921.html?em&ex=1183089600&en=03cc08833369a457&ei=5087%0A So, until now we have Michael Ruse, Sean Carroll, Jerry Coyne, Ken Miller and Richard Dawkins. I never thought Dr. Behe was that influential ;)IDist
June 27, 2007
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Behe waves away evidence suggesting that chloroquine resistance may be the result of sequential, not simultaneous, mutations (Science 298, 74–75; 2002), Honest Ken Miller
yet in Behe's book which Miller supposedly read, Behe cites that very 2002 paper which Miller insinuates Behe waves away! See page 45 where Behe mentions "A requiem for chloroquine", which he references on page 280 as (you guessed it):
2002 Science 298, 74–75
Exactly the paper Miller says Behe waves away. Yet it is right there in Behe's book!!!! The paper may say that
The sequential accumulation of these mutations plausibly explains the observed genetics and epidemiology of CQ resistance
It doesn't actually prove it! What's this? Proof by bald assertion? Does that count for Miller? Honest Ken is not only ignorant he also has serious reading comprehension problems to be writing book reviews in the prestigious scientific journal Nature.scordova
June 27, 2007
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Thanks for the post Sal. I have no access to the article :( But someone told me that Miller's argument is that you can have more than one mutation, none is advantageous, but when they all occur the organism gain an advantage. Is this really what he argues? Doesn't sound darwinian to me at all.IDist
June 27, 2007
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