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What is Randomness? Part 2: Directionality

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From David Nguyen at Think Tank Learning:

See also: What is Randomness? Part 1, with David Nguyen: Contextual bias

Natural Selection and Randomness vs. Intelligent Design; Repost and extension of a post I put forward yesterday: Because of the “waiting time problem”, Darwinists were forced to cast natural selection, Charles Darwin’s supposed ‘designer substitute’, by the wayside.
The waiting time problem in a model hominin population – 2015 Sep 17 John Sanford, Wesley Brewer, Franzine Smith, and John Baumgardner Excerpt: The program Mendel’s Accountant realistically simulates the mutation/selection process,,, Given optimal settings, what is the longest nucleotide string that can arise within a reasonable waiting time within a hominin population of 10,000? Arguably, the waiting time for the fixation of a “string-of-one” is by itself problematic (Table 2). Waiting a minimum of 1.5 million years (realistically, much longer), for a single point mutation is not timely adaptation in the face of any type of pressing evolutionary challenge. This is especially problematic when we consider that it is estimated that it only took six million years for the chimp and human genomes to diverge by over 5 % [1]. This represents at least 75 million nucleotide changes in the human lineage, many of which must encode new information. While fixing one point mutation is problematic, our simulations show that the fixation of two co-dependent mutations is extremely problematic – requiring at least 84 million years (Table 2). This is ten-fold longer than the estimated time required for ape-to-man evolution. In this light, we suggest that a string of two specific mutations is a reasonable upper limit, in terms of the longest string length that is likely to evolve within a hominin population (at least in a way that is either timely or meaningful). Certainly the creation and fixation of a string of three (requiring at least 380 million years) would be extremely untimely (and trivial in effect), in terms of the evolution of modern man. It is widely thought that a larger population size can eliminate the waiting time problem. If that were true, then the waiting time problem would only be meaningful within small populations. While our simulations show that larger populations do help reduce waiting time, we see that the benefit of larger population size produces rapidly diminishing returns (Table 4 and Fig. 4). When we increase the hominin population from 10,000 to 1 million (our current upper limit for these types of experiments), the waiting time for creating a string of five is only reduced from two billion to 482 million years. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4573302/ “Darwinism provided an explanation for the appearance of design, and argued that there is no Designer — or, if you will, the designer is natural selection. If that’s out of the way — if that (natural selection) just does not explain the evidence — then the flip side of that is, well, things appear designed because they are designed.” Richard Sternberg – Living Waters documentary Whale Evolution vs. Population Genetics – Richard Sternberg and Paul Nelson – (excerpt from Living Waters video) https://www.youtube.com/watch?v=0csd3M4bc0Q
Since natural selection has been cast by the wayside, Darwinists now claim, via neutral theory, that the vast majority of the amazing integrated complexity found in life is the result of pure chance instead of the result of natural selection. In the following article Larry Moran quotes Austin Hughes who states, ‘Darwinism asserts that natural selection is the driving force of evolutionary change. It is the claim of the neutral theory, on the other hand, that the majority of evolutionary change is due to chance.’
Austin Hughes and Neutral Theory – Laurence A. Moran – June 19, 2017 Excerpt: Originally proposed by Motoo Kimura, Jack King, and Thomas Jukes, the neutral theory of molecular evolution is inherently non-Darwinian. Darwinism asserts that natural selection is the driving force of evolutionary change. It is the claim of the neutral theory, on the other hand, that the majority of evolutionary change is due to chance. http://sandwalk.blogspot.com/2017/06/austin-hughes-and-neutral-theory.html “many genomic features could not have emerged without a near-complete disengagement of the power of natural selection” Michael Lynch – The Origins of Genome Architecture, intro “a relative lack of natural selection may be the prerequisite for major evolutionary advance” Mae Wan Ho – Beyond neo-Darwinism – Evolution by Absence of Selection
Thus, with Natural selection being tossed aside by the mathematics of population genetics, and by empirical evidence, as the explanation for the ‘appearance of design’ that we see in life, Darwinists now claim, basically, that random mutations, all by their lonesome, with virtually no help from natural selection, (i.e. neutral theory), created all the amazing integrated complexity, i.e. ‘appearance of design’, that we see in life. Small problem with this heavy reliance on ‘random’ mutations that Darwinists now have with neutral theory, mutations are now, empirically, shown to NOT be random mutations but to be directed mutations:
How life changes itself: the Read-Write (RW) genome. – 2013 Excerpt: Research dating back to the 1930s has shown that genetic change is the result of cell-mediated processes, not simply accidents or damage to the DNA. This cell-active view of genome change applies to all scales of DNA sequence variation, from point mutations to large-scale genome rearrangements and whole genome duplications (WGDs). This conceptual change to active cell inscriptions controlling RW genome functions has profound implications for all areas of the life sciences. http://www.ncbi.nlm.nih.gov/pubmed/23876611 WHAT SCIENTIFIC IDEA IS READY FOR RETIREMENT? Fully Random Mutations – Kevin Kelly – 2014 Excerpt: What is commonly called “random mutation” does not in fact occur in a mathematically random pattern. The process of genetic mutation is extremely complex, with multiple pathways, involving more than one system. Current research suggests most spontaneous mutations occur as errors in the repair process for damaged DNA. Neither the damage nor the errors in repair have been shown to be random in where they occur, how they occur, or when they occur. Rather, the idea that mutations are random is simply a widely held assumption by non-specialists and even many teachers of biology. There is no direct evidence for it. On the contrary, there’s much evidence that genetic mutation vary in patterns. For instance it is pretty much accepted that mutation rates increase or decrease as stress on the cells increases or decreases. These variable rates of mutation include mutations induced by stress from an organism’s predators and competition, and as well as increased mutations brought on by environmental and epigenetic factors. Mutations have also been shown to have a higher chance of occurring near a place in DNA where mutations have already occurred, creating mutation hotspot clusters—a non-random pattern. http://edge.org/response-detail/25264 Duality in the human genome – November 28, 2014 Excerpt: The results show that most genes can occur in many different forms within a population: On average, about 250 different forms of each gene exist. The researchers found around four million different gene forms just in the 400 or so genomes they analysed. This figure is certain to increase as more human genomes are examined. More than 85 percent of all genes have no predominant form which occurs in more than half of all individuals. This enormous diversity means that over half of all genes in an individual, around 9,000 of 17,500, occur uniquely in that one person – and are therefore individual in the truest sense of the word. The gene, as we imagined it, exists only in exceptional cases. “We need to fundamentally rethink the view of genes that every schoolchild has learned since Gregor Mendel’s time.,,, According to the researchers, mutations of genes are not randomly distributed between the parental chromosomes. They found that 60 percent of mutations affect the same chromosome set and 40 percent both sets. Scientists refer to these as cis and trans mutations, respectively. Evidently, an organism must have more cis mutations, where the second gene form remains intact. “It’s amazing how precisely the 60:40 ratio is maintained. It occurs in the genome of every individual – almost like a magic formula,” says Hoehe. http://medicalxpress.com/news/2014-11-duality-human-genome.html
Thus, with both natural selection and random mutations shown to virtually non-existent, the primary presuppositions that undergird the entire neo-Darwinian edifice are now shown to false. If Darwinian evolution were a normal science, these findings SHOULD HAVE rendered it to the garbage heap of failed scientific hypothesis. To continue on in the falsification of the Darwinian presupposition of ‘randomness’ within biology, it is now found that there is far less ‘randomness’ and/or ‘random thermodynamic jostling’ within molecular biology than was presupposed by Darwinists: At the 6:52 minute mark of the following video, Jim Al-Khalili states:
“To paraphrase, (Erwin Schrödinger in his book “What Is Life”), he says at the molecular level living organisms have a certain order. A structure to them that’s very different from the random thermodynamic jostling of atoms and molecules in inanimate matter of the same complexity. In fact, living matter seems to behave in its order and its structure just like inanimate matter cooled down to near absolute zero. Where quantum effects play a very important role. There is something special about the structure, about the order, inside a living cell. So Schrodinger speculated that maybe quantum mechanics plays a role in life”. Jim Al-Khalili – Quantum biology – video https://www.youtube.com/watch?v=zOzCkeTPR3Q
The following video goes over many more lines of evidence that have falsified the Darwinian presupposition of 'random thermodynamic jostling' within molecular biology.
Darwinian Materialism vs. Quantum Biology – video https://youtu.be/LHdD2Am1g5Y
In fact, due to quantum non-locality, and the necessity to postulate a 'beyond space and time' cause in order to explain quantum entanglement within molecular biology, advances in quantum biology have now falsified the entire reductive materialistic foundation that lays beneath Darwinian thought. Verse:
Psalm 139:13 For it was You who formed my inmost being; You knit me together in my mother’s womb.

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