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Researcher: “No rhyme or reason” to unexpected sea anemone genome

Tube anemone has surprisingly complex mitochondrial genome/ Sergio Stampar

From ScienceDaily:

New research on tube anemones is challenging everything that evolutionary biologists thought they knew about sea animal genetics. The mitochondrial DNA of the tube anemone, or Ceriantharia, is a real head scratcher, from its unexpected arrangement to its previously unimagined magnitude.

Researchers, including a team from The Ohio State University, have published new findings showing that the DNA of the tube anemone does what few other species’ mitochondrial genomes have been shown to do. It defies the classic doughnut shape it “should” be in and is arranged in several fragmented pieces, the number of which vary depending on the species.

On top of that, the animal now holds the record for the largest mitochondrial genome reported to date. It contains almost 81,000 base pairs, or pieces of genetic information, according to the new study, published online in the journal Scientific Reports. Human mitochondrial DNA contains fewer than 17,000 base pairs.

“These ancient animals have simple behavior and simple anatomy, and so we’ve thought of them as fairly simple creatures until now. But their biology is quite complicated. The genomes of these tube anemones may be more dynamic than those of more-complex and more-recent animals like snails, insects and vertebrates,” said Meg Daly, a professor of evolution, ecology and organismal biology at Ohio State.

About the mitochondrial DNA that is central to this study: This isn’t the DNA most of us remember learning about in school — the instructions found within the nucleus of each cell of an organism and organized in the linear double-helix.

Rather, mitochondrial DNA is usually circular in shape and contains much less information than nuclear DNA. And it lives inside the mitochondria — double-membraned structures found in multitudes within the cell, outside the nucleus. Mitochondria are responsible for energy production, and are sometimes called the “cellular powerhouses” of living beings.

While scientists have been able to sequence the mitochondrial DNA of other similar animals, they’ve hit a roadblock with these tube anemones until now, Daly said. About two decades ago, a researcher tried to create a blueprint of the mitochondrial genome based on the theory that it would be circular.

“It was impossible and no one really knew why until now,” said Daly, who has made a career of studying sea anemones and their biodiversity.

Using advanced supercomputer technology, researchers examined two species of tube anemone and found that one has five linear fragments of mitochondrial DNA and the other has eight. Previously, scientists had found a linear genome in the mitochondria of the jellyfish, but the linear structure combined with the variation in size and number of fragments seen in the tube anemone is unprecedented.

“We think that the typical loop arrangement we find makes sense, because one of the advantages of the mitochondria having a circular genome is that that it replicates easily,” she said.

“We’ve thought of this loop-shaped design as something that helps the mitochondria do its job quickly and efficiently.”

Now, it is left to Daly and others who study these creatures to figure out why this might have happened from an evolutionary perspective.

“So far, there’s no rhyme or reason to the anemones having this unusual mitochondrial genome,” Daly said. Paper. (open access) – Sérgio N. Stampar, Michael B. Broe, Jason Macrander, Adam M. Reitzel, Mercer R. Brugler, Marymegan Daly. Linear Mitochondrial Genome in Anthozoa (Cnidaria): A Case Study in Ceriantharia. Scientific Reports, 2019; 9 (1) DOI: 10.1038/s41598-019-42621-z More.

This doesn’t seem to be an era of simple answers even for “simple” creatures. At least they aren’t “Darwinsplaining” the situation.

See also: Two Jellyfish Genomes Differ “As Drastically As Humans Do From Sea Urchins.”

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Then just get new rocks.
That’s a defeatist attitude. :) Brother Brian
1- No cooking required- palytoxin 2- Once you have finished all of the other treatments any palytoxin left would be negligible and easily dealt with via a venting fan. But yes, if you and your family stick your heads in a 500 degree oven that is baking the rock and take a few deep breaths, you may die. ET
Then just get new rocks. ET
Take the freshly treated rock- baked, bleached, etc.- and place it in an equivalent aquarium that never had any anemones. See if they show up on the rock.
Yes, we in the hobby call that a quarantine (or hospital) tank. And that is what I did. And they kept reappearing. The only thing I didn’t do is throw the rocks in the oven. But if you know anything about reef tanks, you never do that because of palytoxins that are found in some zoanthid corals. Cook them and you could kill your entire family. Brother Brian
Brother Spearshake- Take the freshly treated rock- baked, bleached, etc.- and place it in an equivalent aquarium that never had any anemones. See if they show up on the rock. The point is you may be cleaning the wrong thing in order to get rid of your foe. ET
I have a marine aquarium and one of the banes of marine aquarium keepers is Aiptasia a type of anemone. The anemones that people want to keep because they are hosts to clownfish are notoriously difficult to keep, yet Aiptasia are almost indestructable. I have injected them with boiling water, with strong base and with lemon juice, all to little effect. I have removed the rock they are housed on and set it in the sun for weeks, and they return when the rock is returned to the aquarium. I have even soaked the rock in peroxide and bleach, again to no avail. Brother Brian

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