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At Evolution News: Mammoth Support for Devolution

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Michael Behe writes:

The more science progresses, the more hapless Darwin seems.

In my 2019 book Darwin Devolves I showed that random mutation and natural selection are powerful de-volutionary forces. That is, they quickly lead to the loss of genetic information. The reason is that, in many environmental circumstances, a species’ lot can be improved most quickly by breaking or blunting pre-existing genes. To get the point across, I used an analogy to a quick way to improve a car’s gas mileage — remove the hood, throw out the doors, get rid of any excess weight. That will help the car go further, but it also reduces the number of features of the car. And it sure doesn’t explain how any of those now-jettisoned parts got there in the first place.

Image credit: Thomas Quine, CC BY 2.0 , via Wikimedia Commons.

The Bottom Line

The same goes for biology. Helpful mutations that arrive most quickly are very much more likely to degrade genetic features than to construct new ones. The featured illustration in Darwin Devolves was the polar bear, which has accumulated a number of beneficial mutations since it branched off from the brown bear a few hundred thousand years ago. Yet the large majority of those beneficial mutations were degradative — they broke or damaged pre-existing genes. For example, a gene involved in fur pigmentation was damaged, rendering the beast white — that helped; another gene involved in fat metabolism was degraded, allowing the animal to consume lots of seal blubber, its main food in the Arctic — that helped, too. Those mutations were good for the species in the moment — they did improve its chances of survival. But degradative mutations don’t explain how the functioning genes got there in the first place. Even worse, the relentless burning of genetic information to adapt to a changing environment will make a species evolutionarily brittle and more prone to extinction. The bottom line: Although random mutation and natural selection help a species adapt, Darwinian processes can’t account for the origins of sophisticated biological systems.

In Darwin Devolves, I also mentioned work on DNA extracted from frozen woolly mammoth carcasses that showcased devolution: “26 genes were shown to be seriously degraded, many of which (as with polar bear) were involved in fat metabolism, critical in the extremely cold environments that the mammoth roamed.” It turns out that was an underestimate. A new paper1 that has sequenced DNA from several more woolly mammoth remains says the true number is more than triple that — 87 genes broken compared to their elephant relatives. 

There’s Lots More

The point is that these gene losses aren’t side shows — they are the events that transformed an elephant into a mammoth, that adapted the animal to its changing environment. A job well done, yes, but now those genes are gone forever, unavailable to help with the next change of environment. Perhaps that contributed to eventual mammoth extinction.

As quoted above, the mammoth authors note that gene losses can be adaptive, and they cited a paper that I hadn’t seen before. I checked it out and it’s a wonderful laboratory evolution study of yeast.2 Helsen et al. (2020) used a collection of yeast strains in which one of each different gene in the genome had been knocked out. They grew the knockout yeast in a stressful environment and watched to see how the microbes evolved to handle it. Many of the yeast strains, with different genes initially knocked out, recovered, and some even surpassed the fitness of wild-type yeast under the circumstances. The authors emphasized the fact of the evolutionary recovery. However, they also clearly stated (but don’t seem to have noticed the importance of the fact) that all of the strains rebounded by breaking other genes, ones that had been intact at the beginning of the experiment. None built anything new, all of them devolved.

Well, Duh

That’s hardly a surprise. At least in retrospect, it’s easy to see that devolution must happen — for the simple reason that helpful degradative mutations are more plentiful than helpful constructive ones and thus arrive more quickly for natural selection to multiply. The more recent results recounted here just pile more evidence onto that gathered in Darwin Devolves showing Darwin’s mechanism is powerfully devolutionary. That simple realization neatly explains results ranging from the evolutionary behavior of yeast in a comfy modern laboratory, to the speciation of megafauna in raw nature millions of years ago, and almost certainly to everything in between.

References

  1. Van der Valk, Tom, et al. 2022. Evolutionary consequences of genomic deletions and insertions in the woolly mammoth genome. iScience 25, 104826.
  2. Helsen, J. et al. 2020. Gene loss predictably drives evolutionary adaptation. Molecular Biology and Evolution 37, 2989–3002.

Behe’s conclusions have significant implications: evolutionary adaptation seems to progress by breaking existing genes in such a way as to confer a survival advantage in a niche environment; the result is a more “brittle” species with fewer options for surviving further environmental stresses; the mystery of the origin of the original genes is in no way explained by natural means at any step in the process. Rather than Darwinian evolution providing a mechanism for the “origin of the species,” it more adequately explains the demise of species.

Comments
The "kind" depends on the organism. Some kinds are at the level of Family whereas others are at Genus.ET
August 17, 2022
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Querius/12 My question was directed to Caspian.chuckdarwin
August 17, 2022
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Cladistics doesn't support evolution by means of blind and mindless processes. And evolutionary relationships are assumed.ET
August 17, 2022
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I see my link to Berkeley edu is broken so here it is : https://ucmp.berkeley.edu/clad/clad1.html#:~:text=The%20basic%20idea%20behind%20cladistics,not%20present%20in%20distant%20ancestors.Alan Fox
August 16, 2022
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Querius:
First, enlighten us about what precisely defines a species? How about a subspecies? Or family or genus?
Here's a useful introduction to cladistics
.Does similarity of proteins or the changes in DNA currently determine taxonomic classification?
In some cases. The additional tool of molecular phylogenetics has certainly refined the taxonomic approach. The consilience is a powerful indication that evolutionary theory fits the evidence.Alan Fox
August 16, 2022
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Chuckdarwin @12, First, enlighten us about what precisely defines a species? How about a subspecies? Or family or genus? Does similarity of proteins or the changes in DNA currently determine taxonomic classification? -QQuerius
August 16, 2022
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Caspian/9 I’m almost afraid to ask, but here goes. At what taxonomic level does the biblical “kind” referenced in Genesis occur?chuckdarwin
August 16, 2022
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Seversky@7
If Dr Behe is correct and genes can only be broken not constructed then, rather like with Sanford’s genetic entropy, how is it we’re still here? Shouldn’t all life have collapsed into catastrophic genetic failure long ago? In fact, if it is so prone to degradation, how did it ever get started in the first place?
Dr. Behe isn't saying that. He is saying that the Darwinistic mechanism of random genetic variation+NS can only break genes, not construct novel and complicated new ones with adaptive advantages, as indicated by much recent research. Outside intervention by some sort of very high intelligence(s) is the only viable candidate for that role, which obviously exists because over the history of life countless species have existed for a time (fixed genetically as far as there being no new information), until genetic degradation or other catastrophe cut their life short. Also obviously, in order for the evolutionary process to continue, occasionally a species is genetically "meddled with" by this outside high intelligence, inserting novel adaptively functional new genetic information. This is a very rough model, but something along these lines must be the case. Unless you can cite plenty of cases of experimentally induced Darwinistic evolution of truly novel adaptive complex genetic structures, and/or incontrovertible fossil evidence of the long Darwinistic succession of minute incremental changes leading to complex novel new adaptive genetic changes (rather than the actual fossil record of abrupt transitions of species with no gradual transformations). Or you can cite evidence for some other undirected purposeless mechanism of "evolution". We're waiting.doubter
August 16, 2022
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Chuck and Seversky - why don’t you write to Behe raising your doubts and telling objections? I wrote to him a couple of times and had a fast response each time.Belfast
August 16, 2022
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Seversky @7: Dembski's law of conservation of information doesn't mean that information cannot be lost (natural forces destroy information all the time - just try to read a newspaper that's been lying in a mud puddle for a while), but that natural processes cannot generate more information than already exists in the system to begin with. And by the way, this principle isn't just Dembski's idea, it also arises out of the physics of quantum statistical thermodynamics. One of the remarkable things about the reproductive process of all living things is how few degradative errors occur. The Designer (referring to Genesis) designed living things to reproduce "after their kind", and that's consistent with all the observational evidence of nature that we have available, granting that small variations preserve the original "kind."Caspian
August 16, 2022
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Seversky at 7, You pretend to not get it. Facts matter not criticism of God and how He works. Dr. Dembski has shown data that others are free to examine as well. But here? Denial after denial. Followed by more denial.relatd
August 16, 2022
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If Dr Dr Dembski's conservation law for information is true, meaning information can neither be created nor destroyed then genetic information cannot be lost, just relocated. If Dr Behe is correct and genes can only be broken not constructed then, rather like with Sanford's genetic entropy, how is it we're still here? Shouldn't all life have collapsed into catastrophic genetic failure long ago? In fact, if it is so prone to degradation, how did it ever get started in the first place? And why would any designer in his/her/its right mind ever use such a failure-prone system to transmit information of any kind at all?Seversky
August 16, 2022
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It would seem to me that Covid and its many variants would be a good subject to see the effects of the mutations on function. I believe something like this was done with the Spanish Flu virus.Mark from CO
August 16, 2022
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R: my tongue was planted firmly in cheek.bornagain77
August 15, 2022
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Ba77 at 3, "I think someone ought to study the genomes of Darwinian atheists to find out which deletions are causing such stunning intellectual blindness on their part." I have accumulated enough evidence that shows no 'intellectual blindness' actually exists. My conclusion is simply a pattern of denial and constant reference to blind, unguided chance, which is not goal oriented, as the ONLY possible answer. That's like saying blind, unguided chance designed and built your computer, which is very primitive when compared to living things in terms of function.relatd
August 15, 2022
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The full quote,
In Darwin Devolves, I also mentioned work on DNA extracted from frozen woolly mammoth carcasses that showcased devolution: “26 genes were shown to be seriously degraded, many of which (as with polar bear) were involved in fat metabolism, critical in the extremely cold environments that the mammoth roamed.” It turns out that was an underestimate. A new paper1 that has sequenced DNA from several more woolly mammoth remains says the true number is more than triple that — 87 genes broken compared to their elephant relatives. There’s Lots More The point is that these gene losses aren’t side shows — they are the events that transformed an elephant into a mammoth, that adapted the animal to its changing environment. A job well done, yes, but now those genes are gone forever, unavailable to help with the next change of environment. Perhaps that contributed to eventual mammoth extinction.
To which our Darwinian apologist, ChuckyD, responds, "There’s no evidence that this so-called gene loss has had a detrimental impact on either species." LOL, the peer reviewed paper that Michael Behe cited not withstanding of course, :)
Evolutionary consequences of genomic deletions and insertions in the woolly mammoth genome - 2022 Highlights •Two new high-quality woolly mammoth genomes have been generated •A new method was used to identify deletions and insertions in woolly mammoths •At least 87 genes have been affected by deletions or indels in the mammoth lineage •Genes involved in skeletal morphology and hair growth are affected by deletions Summary Woolly mammoths had a set of adaptations that enabled them to thrive in the Arctic environment. Many mammoth-specific single nucleotide polymorphisms (SNPs) responsible for unique mammoth traits have been previously identified from ancient genomes. However, a multitude of other genetic variants likely contributed to woolly mammoth evolution. In this study, we sequenced two woolly mammoth genomes and combined these with previously sequenced mammoth and elephant genomes to conduct a survey of mammoth-specific deletions and indels. We find that deletions are highly enriched in non-coding regions, suggesting selection against structural variants that affect protein sequences. Nonetheless, at least 87 woolly mammoth genes contain deletions or indels that modify the coding sequence, including genes involved in skeletal morphology and hair growth. These results suggest that deletions and indels contributed to the unique phenotypic adaptations of the woolly mammoth, and were potentially critical to surviving in its natural environment. https://www.sciencedirect.com/science/article/pii/S2589004222010987
I think someone ought to study the genomes of Darwinian atheists to find out which deletions are causing such stunning intellectual blindness on their part. :)bornagain77
August 15, 2022
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Behe writes:
The point is that these gene losses aren’t side shows — they are the events that transformed an elephant into a mammoth, that adapted the animal to its changing environment.
I don’t think that elephants “transformed” into mammoths. Elephants and mammoths diverged from a common ancestor 6 mya. There are two extant species, the African and Asian elephant. There’s no evidence that this so-called gene loss has had a detrimental impact on either species.chuckdarwin
August 15, 2022
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Darwinian Evolution has devolved into a population of Brittle Trolls who break when new info is presented to them. ;) Andrewasauber
August 15, 2022
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