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Darwinian Debating Device #16: De Nile is a river in Egypt . . .

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. . . and blatant denial is not an appropriate response to the reality of and/or easily known facts concerning functionally specific complex organisation and /or associated information, FSCO/I:

fscoi_factsFacts are stubborn things, but people can be more stubborn than that.

(That is, there are two types of ignorance,

I: simple ignorance because one does not know the facts and/or may not understand them, but also

II: ideological closed-mindedness due to being controlled by mind-closing agendas hostile to, selectively hyperskeptical towards and dismissive or suppressive of inconvenient facts,

. . . such as those we just saw regarding FSCO/I.)

Why am I saying this?

Poster-boy no 1, rich @ 252  in the UD no bomb thread:

[KF:] “Your comment no 248 to me is 1071 characters, at 7 bits each, wel past the 500 bit threshold.”

[rich:] very good – now you need to show how many comments could have performed the same function across multiple langues,uses of syntax, abbreviations, different audiences, etc.

And Writing messages is (mainly) spontaneous generation, which is NOTHING AT ALL LIKE LIFE.

But….but…but…BIG NUMBERS!

Rich again, at no 400 (and repeatedly thereafter),

. . . on the folly of FCSIO (and how it differs from CSI) as ‘exemplified by the internet’

*You model spontaneous generation (of text)
*You don’t account for functionally equivalent variants
*You can’t specify in anything other than English
*You wont take up design challenges
*Non of this has anything to do with life
*But..but..but..BIG NUMBERS.

“Big numbers” of course, is a dismissive way of ducking the unmet challenge of blind chance and mechanical necessity finding islands of function constrained by the need for having many well matched, correctly arranged components to achieve function. Such as:

a: the node-arcs Wicken wiring diagram network of say an ABU Cardinal . . . Swedish made! (so much for English only, please) . . . fishing reel (reducible to a structured set of y/n q’s, as is commonly done using say AutoCAD etc);

Fig 6: An exploded view of a classic ABU Cardinal, showing  how functionality arises from a highly specific, tightly constrained complex arrangement of matched parts according to a "wiring diagram." Such diagrams are objective (the FSCO/I on display here is certainly not "question-begging," as some -- astonishingly -- are trying to suggest!), and if one is to build or fix such a reel successfully, s/he had better pay close heed.. Taking one of these apart and shaking it in a shoe-box is guaranteed not to work to get the reel back together again. (That is, even the assembly of such a complex entity is functionally specific and prescriptive information-rich.)
Fig 6: An exploded view of a classic ABU Cardinal, showing how functionality arises from a highly specific, tightly constrained complex arrangement of matched parts according to a “wiring diagram.” Such diagrams are objective (the FSCO/I on display here is certainly not “question-begging,” as some — astonishingly — are trying to suggest!), and if one is to build or fix such a reel successfully, s/he had better pay close heed.. Taking one of these apart and shaking it in a shoe-box is guaranteed not to work to get the reel back together again. (That is, even the assembly of such a complex entity is functionally specific and prescriptive information-rich.)

b: a functional . . . Russian I believe . . . mechanical watch (as opposed to a jumbled pile of parts):

A watch movement can be accurate, but not truthful; as a watch COMPUTES, it does not CONTEMPLATE . . . much hinges from this
A watch movement can be accurate, but not truthful; as a watch COMPUTES, it does not CONTEMPLATE . . . much hinges from this

c: sand castles (vs dirt piles, including say those built by volcanoes):

A sand castle
A sand castle

d: Lego brick castles (as opposed to haphazard piles of said bricks):

Lego_Castle

e: Brilliant cut diamonds (as opposed to diamonds in the rough):

finished

f: And of course, the protein synthesis mechanism that is in every living cell of every biological organism, which uses the genetic code (a case of machine code) and associated algorithms plus correctly arranged execution machines:

Protein Synthesis (HT: Wiki Media)
Protein Synthesis (HT: Wiki Media)

In each of these cases, we have multiple, well matched components that must be correctly organised and coupled together to effect the requisite function.

A text string is just a special case of such a nodes-arcs wiring diagram network, a string -*-*-*-*- like pearls on a necklace. As AutoCAD etc and the exploded view of the Abu Cardinal reel above show, the general 3-D form of such a wiring diagram can be reduced to a string of structured Y/N . . . one bit info capacity . . . questions and stored as strings. So, the string case is WLOG, without loss of generality (as has been repeatedly pointed out but willfully ignored in order to sneer at text string cases).

As for the strawman tactic assertion of failing to address functionally equivalent variants, all along, the discussion has pivoted on the concept of a sea of possible configurations that has in it islands of function, which may well have peaks and valleys of better or lesser effectiveness, or variations that carry out the same specific functionality.  Thus, the point of the case E from zone T in wider space W (standing in for Omega . . . hint, hint as in s = k log w etc) in this infographic which has been used quite a few times in recent months (and the underlying remarks by WmAD in his NFL as cited, and the 100+ year old concept of clusters of microstates or configs studied in statistical thermodynamics that lies aback the simple metaphor “islands of function”):

csi_defnIn such a situation, the paradigm case is OOL, where at best we start with some fairly simple chemicals in a Darwin warm salt-laden pond or a comet core or a gas giant moon (to get a reducing atmosphere) etc. These start with molecules scattered across the pond etc, that need to assemble in ways that yield a complex, gated, metabolising cell with a protein assembly mechanism and an additional von Neumann kinematic self replicating facility with coded tape/blueprint for the requisite components plus appropriate co-ordination and algorithms.

U/D, Oct 28: here is the challenge such has to meet at OOL:

Fig. A: Mignea's schematic of the requisites of kinematic self-replication, showing duplication and arrangement then separation into daughter automata. This requires stored algorithmic procedures, descriptions sufficient to construct components, means to execute instructions, materials handling, controlled energy flows, wastes disposal and more. (Source: Mignea, 2012, slide show; fair use.
Fig. A: Mignea’s schematic of the requisites of kinematic self-replication, showing duplication and arrangement then separation into daughter automata. This requires stored algorithmic procedures, descriptions sufficient to construct components, means to execute instructions, materials handling, controlled energy flows, wastes disposal and more. (Source: Mignea, 2012, slide show; fair use.

. . . with a general model for studying how systems can explore/ “search” configurational possibility spaces and interact with the external world:

gen_sys_proc_model

. . . and, all along the tree of life, courtesy Smithsonian (note its root, OOL):

Darwin-ToL-Smithsonian400

That is, after all, the main phenomenon to be explained per evolutionary materialism on blind chance plus mechanical necessity on the gamut of the observed cosmos: the living cell.

Many diverse cells are possible, but all of them depend crucially on embedded FSCO/I. (Where, of course, on trillions of cases in point — start with the Internet and move on to screws, bolts and nuts etc . . . — there is but one empirically known, needle in haystack analysis reliable source for FSCO/I under such circumstances, intelligently directed configuration, aka design. Thus there is an inductively strong case for inferring design as best warranted causal explanation from FSCO/I as reliable sign.)

Where, too, it is appropriate to note the following exchange between Orgel and Shapiro on the major evolutionary materialistic schools of thought on OOL:

[[Shapiro:] RNA’s building blocks, nucleotides contain a sugar, a phosphate and one of four nitrogen-containing bases as sub-subunits. Thus, each RNA nucleotide contains 9 or 10 carbon atoms, numerous nitrogen and oxygen atoms and the phosphate group, all connected in a precise three-dimensional pattern . . . .  [[S]ome writers have presumed that all of life’s building could be formed with ease in Miller-type experiments and were present in meteorites and other extraterrestrial bodies. This is not the case.A careful examination of the results of the analysis of several meteorites led the scientists who conducted the work to a different conclusion: inanimate nature has a bias toward the formation of molecules made of fewer rather than greater numbers of carbon atoms, and thus shows no partiality in favor of creating the building blocks of our kind of life . . . .To rescue the RNA-first concept from this otherwise lethal defect, its advocates have created a discipline called prebiotic synthesis. They have attempted to show that RNA and its components can be prepared in their laboratories in a sequence of carefully controlled reactions, normally carried out in water at temperatures observed on Earth . . . .

Unfortunately, neither chemists nor laboratories were present on the early Earth to produce RNA . . .

[[Orgel:] If complex cycles analogous to metabolic cycles could have operated on the primitive Earth, before the appearance of enzymes or other informational polymers, many of the obstacles to the construction of a plausible scenario for the origin of life would disappear . . . .It must be recognized that assessment of the feasibility of any particular proposed prebiotic cycle must depend on arguments about chemical plausibility, rather than on a decision about logical possibility . . . few would believe that any assembly of minerals on the primitive Earth is likely to have promoted these syntheses in significant yield . . . .  Why should one believe that an ensemble of minerals that are capable of catalyzing each of the many steps of [[for instance] the reverse citric acid cycle was present anywhere on the primitive Earth [[8], or that the cycle mysteriously organized itself topographically on a metal sulfide surface [[6]? . . .  Theories of the origin of life based on metabolic cycles cannot be justified by the inadequacy of competing theories: they must stand on their own . . . .  The prebiotic syntheses that have been investigated experimentally almost always lead to the formation of complex mixtures. Proposed polymer replication schemes are unlikely to succeed except with reasonably pure input monomers. No solution of the origin-of-life problem will be possible until the gap between the two kinds of chemistry is closed. Simplification of product mixtures through the self-organization of organic reaction sequences, whether cyclic or not, would help enormously, as would the discovery of very simple replicating polymers. However, solutions offered by supporters of geneticist or metabolist scenarios that are dependent on “if pigs could fly” hypothetical chemistry are unlikely to help.  [[Emphases added.]

Mutual ruin, in a nutshell.

Mutual ruin, on precisely the challenge of origin of the FSCO/I in the cell in its genes and its interlocking , astonishingly complex metabolic processes that dwarf the FSCO/I in say a petroleum refinery . . . while being carried out in a tiny automaton smaller than the head of a pin:

Petroleum refinery block diagram illustrating FSCO/I in a process-flow system
Petroleum refinery block diagram illustrating FSCO/I in a process-flow system

Indeed, it is worth letting Denton’s classic comment of 1985 speak with full force:

To grasp the reality of life as it has been revealed by molecular biology, we must magnify a cell a thousand million times until it is twenty kilometers in diameter [[so each atom in it would be “the size of a tennis ball”] and resembles a giant airship large enough to cover a great city like London or New York. What we would then see would be an object of unparalleled complexity and adaptive design. On the surface of the cell we would see millions of openings, like the port holes of a vast space ship, opening and closing to allow a continual stream of materials to flow in and out. If we were to enter one of these openings we would find ourselves in a world of supreme technology and bewildering complexity. We would see endless highly organized corridors and conduits branching in every direction away from the perimeter of the cell, some leading to the central memory bank in the nucleus and others to assembly plants and processing units. The nucleus itself would be a vast spherical chamber more than a kilometer in diameter, resembling a geodesic dome inside of which we would see, all neatly stacked together in ordered arrays, the miles of coiled chains of the DNA molecules. A huge range of products and raw materials would shuttle along all the manifold conduits in a highly ordered fashion to and from all the various assembly plants in the outer regions of the cell. 

We would wonder at the level of control implicit in the movement of so many objects down so many seemingly endless conduits, all in perfect unison.We would see all around us, in every direction we looked, all sorts of robot-like machines . . . . We would see that nearly every feature of our own advanced machines had its analogue in the cell:artificial languages and their decoding systems, memory banks for information storage and retrieval, elegant control systems regulating the automated assembly of components, error fail-safe and proof-reading devices used for quality control, assembly processes involving the principle of prefabrication and modular construction . . . . However, it would be a factory which would have one capacity not equaled in any of our own most advanced machines, for it would be capable of replicating its entire structure within a matter of a few hours . . . . 

Unlike our own pseudo-automated assembly plants, where external controls are being continually applied, the cell’s manufacturing capability is entirely self-regulated . . . . [[Denton, Michael, Evolution: A Theory in Crisis, Adler, 1986,pp. 327 – 331. This work is a classic that is still well worth reading. Emphases added. (NB: The 2009 work by Stephen Meyer of Discovery Institute, Signature in the Cell, brings this classic argument up to date. The main thesis of the book is that: “The universe is comprised of matter, energy, and the information that gives order [[better: functional organisation]  to matter and energy, thereby bringing life into being. In the cell, information is carried by DNA, which functions like a software program. The signature in the cell is that of the master programmer of life.” Given the sharp response that has provoked, the onward e-book responses to attempted rebuttals, Signature of Controversy, would also be excellent, but sobering and sometimes saddening, reading.) ]

As for the assertion that I and others will not take up and respond to challenges to design as cause of FSCO/I, the very examples of the lego pile, the sand castle and the brilliant cut diamond give the lie to such bare faced false accusations, as well as dozens of other cases over the years. (Look, mon, I had a very senior Govt officer on the phone to me already for the morning and have had to do other things also; please have the reasonableness to take me at my word when I say real life has to take priority. You owe us an apology. Not that we are holding our collective breath.)

As for the brazen assertion that none of this has anything to do with cell based life, let the OOL researchers Orgel and Wicken answer from the 1970’s.

ORGEL, 1973:

 . . . In brief, living organisms are distinguished by their specified complexity. Crystals are usually taken as the prototypes of simple well-specified structures, because they consist of a very large number of identical molecules packed together in a uniform way. Lumps of granite or random mixtures of polymers are examples of structures that are complex but not specified. The crystals fail to qualify as living because they lack complexity; the mixtures of polymers fail to qualify because they lack specificity. [The Origins of Life (John Wiley, 1973), p. 189.]

WICKEN, 1979:

Organized’ systems are to be carefully distinguished from ‘ordered’ systems.  Neither kind of system is ‘random,’ but whereas ordered systems are generated according to simple algorithms [i.e. “simple” force laws acting on objects starting from arbitrary and common- place initial conditions] and therefore lack complexity, organized systems must be assembled element by element according to an [originally . . . ] external ‘wiring diagram’ with a high information content . . . Organization, then, is functional complexity and carries information. It is non-random by design or by selection, rather than by the a priori necessity of crystallographic ‘order.’ [“The Generation of Complexity in Evolution: A Thermodynamic and Information-Theoretical Discussion,” Journal of Theoretical Biology, 77 (April 1979): p. 353, of pp. 349-65. (Emphases and notes added. Nb: “originally” is added to highlight that for self-replicating systems, the blue print can be built-in.)]

Backed up by Nobel equivalent prize holder, Sir Fred Hoyle, at the turn of the ’80’s:

Once we see that life is cosmic it is sensible to suppose that intelligence is cosmic. Now problems of order, such as the sequences of amino acids in the chains which constitute the enzymes and other proteins, are precisely the problems that become easy once a directed intelligence enters the picture, as was recognised long ago by James Clerk Maxwell in his invention of what is known in physics as the Maxwell demon. The difference between an intelligent ordering, whether of words, fruit boxes, amino acids, or the Rubik cube, and merely random shufflings can be fantastically large, even as large as a number that would fill the whole volume of Shakespeare’s plays with its zeros. So if one proceeds directly and straightforwardly in this matter, without being deflected by a fear of incurring the wrath of scientific opinion, one arrives at the conclusion that biomaterials with their amazing measure or order must be the outcome of intelligent design. No other possibility I have been able to think of in pondering this issue over quite a long time seems to me to have anything like as high a possibility of being true.” [[Evolution from Space (The Omni Lecture[ –> Jan 12th 1982]), Enslow Publishers, 1982, pg. 28.]

I suggest to you that the above three cites give the root of the descriptive terms specified complexity, complex specified information, functionally specific complex organisation and  information, and intelligent design. Where INTELLIGENT is needed to stress what is meant by design given the way language tends to get twisted into pretzels in recent decades.

Rich’s selectively hyperskeptical quarrel is not with me or us, but with the highly informed views of quite significant researchers, as well as just plain ordinary readily evident but apparently ideologically inconvenient facts.

______

Okay, that should be enough to highlight that FSCO/I — actually, a commonplace phenomenon, as familiar as the files on your computer, and as routinely quantifiable as the file sizes you see routinely reported by your operating system or the genetic info in the codes for a protein — is not a dubious and ill-conceived concept fraudulently foisted on the world by “IDiots” who are “Creationists in cheap tuxedos.” And, it is most directly relevant to life, especially its origin, but also the origin of major body plans which just for genome sizes reasonably require 10 – 100+ million bases of functional genetic information, dozens of times over.

One last point there was an unjustified complaint that I locked off comments for a FYI/FTR headlined post. This cleverly omitted to note that the post was basically a headlined comment in a discussion thread, and that there was and is ample opportunity to discuss in other threads. I quite properly reserve the right to make occasional FYI/FTR comments from time to time, as general notices. My making such obviously does not block discussion of same here at UD or elsewhere. END

Comments
DG, I think BA intends to fold DD's into the WAC's in some fashion. Meanwhile if you do a category search you can catch all seventeen numbered ones here: https://uncommondescent.com/category/ddd/ KFkairosfocus
October 27, 2014
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Perhaps we could have a link from the front page to the entire set?DillyGill
October 27, 2014
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Excellent timing really, doing this series in Darwinian debating devices as you let the mob back through the door. It has been very interesting. Great job guys.DillyGill
October 27, 2014
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De Nile is a river in Egypt . . .kairosfocus
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