Andrew Rowell over at ID in the UK has done a very good job of exposing the problems with having methodological naturalism as the exclusive methodology for the natural sciences:
The faith of the methodological naturalist.
The basic articles of faith for a methodological naturalist go something like this:
We have found excellent naturalistic explanations for many phenomenon in nature.
Therefore
we believe every phenomenon in nature will have a naturalistic explanation.
Therefore
we make it a strict rule that science is exclusively the study of possible naturalistic explanations for what can be observed in the universe.
Science is not the search for the truth about the origin, operation and destiny of the universe it is limited exclusively to purely naturalistic explanations of the origin, operation and destiny of the universe.
The methodological naturalist will choose a naturalistic explanation over a meta-nature explanation to be taught as the truth in science lessons even if it is not actually true. Read More ›