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Pearlside eyes unexpectedly at odds with other deep-sea fishes’: Chance, fate, or design? Are we allowed to wonder? 

Abstract:Most vertebrates have a duplex retina comprising two photoreceptor types, rods for dim-light (scotopic) vision and cones for bright-light (photopic) and color vision. However, deep-sea fishes are only active in dim-light conditions; hence, most species have lost their cones in favor of a simplex retina composed exclusively of rods. Although the pearlsides, Maurolicus spp., have such a pure rod retina, their behavior is at odds with this simplex visual system. Contrary to other deep-sea fishes, pearlsides are mostly active during dusk and dawn close to the surface, where light levels are intermediate (twilight or mesopic) and require the use of both rod and cone photoreceptors. This study elucidates this paradox by demonstrating that the pearlside retina does not have rod Read More ›

Science Mag: Scallop’s eye “Fine-tuned for image formation”

We typically think of eyes as having one or more lenses for focusing incoming light onto a surface such as our retina. However, light can also be focused using arrays of mirrors, as is commonly done in telescopes. A biological example of this is the scallop, which can have up to 200 reflecting eyes that focus light onto two retinas. Palmer et al. find that spatial vision in the scallop is achieved through precise control of the size, shape, and packing density of the tiles of guanine that together make up an image-forming mirror at the back of each of the eyes. More. The authors dare to use the term “fine-tuned,” with all its career-limiting damage? The pecten scallop uses mirrors Read More ›

New Scientist: Was it a huge dose of dopamine that made us so smart?

From Andy Coghlan at New Scientist: We may owe some of our unique intelligence to a generous supply of a signalling chemical called dopamine in brain regions that help us think and plan. Our brains produce far more dopamine in these regions than the brains of other primates like apes.More. Naturalist ideology requires something like extra dopamine production to be seen as a cause, not an effect.  Of course, what we are really talking about is human consciousness, whose origin no one understands. And whatta feast of just-so science! See also: Human/primate evolution: Eating fruit led to bigger brains? Climate change made us smart Retroviruses play a role in development of human brain? Tooth size not linked to brain size in early humans Read More ›

Researchers: Sponges definitely oldest animals, not “anatomically complex” comb jellies

This is a complex and long-running dispute. From ScienceDaily: Commenting on the breakthrough research, Professor Pisani said: “The fact is, hypotheses about whether sponges or comb jellies came first suggest entirely different evolutionary histories for key animal organ systems like the nervous and the digestive systems. Therefore, knowing the correct branching order at the root of the animal tree is fundamental to understanding our own evolution, and the origin of key features of the animal anatomy.” In the new study, Professor Pisani and colleagues used cutting edge statistical techniques (Posterior Predictive Analyses) to test whether the evolutionary models routinely used in phylogenetics can adequately describe the genomic datasets used to study early animal evolution. They found that, for the same Read More ›

Dutch universities involved in co-ordinated origin of life studies

Suzan Mazur author of Origin of Life Circus, talks to Jan-Willem Mantel of the new Dutch Origins Center sponsored by the University of Groningen on the Dutch group effort: Suzan Mazur: The Dutch Origins Center is a virtual center, but would you say the University of Groningen serves as sort of the hub? Jan-Willem Mantel: In a way. We try to create a flat network. We have groups in 17 or 18 universities and/or independent research organizations and we try to avoid one university leading or dominating. But, of course, the practical work has to be done somewhere and that is being done by Groningen. In an intellectual sense, however, you can’t say Groningen or any one of the others Read More ›

Science is simply “what scientists do”? That’s all?

From theoretical physicist Sabine Hossenfelder at her blog Back(reaction): On the one hand, I understand the concerns about breaking with centuries of tradition. We used to followed up each hypothesis with experimental test, and the longer the delay between hypothesis and test, the easier for pseudoscience to take foothold. On the other hand, I agree that speculation is a necessary part of science and new problems sometimes require new methods. Insisting on ideals of the past might mean getting stuck, maybe forever. Even more important, I think it’s a grave mistake to let anyone define what we mean by doing science. Because who gets to decide what’s the right thing to do? Should we listen to Helge Kragh? Peter Woit? Read More ›

And now for something completely different: Do angels exist?

The question is knottier than it might at first appear. Ken Francis, journalist and author of The Little Book of God, Mind, Cosmos and Truth, writes at New English Review: The beginning of the universe was a supernatural event, as only something that transcends time, space and matter could cause it to happen. Secondly, if the supernatural is real, then the existence of disembodied spirits is possible. If we are not our physical bodies, then a spiritual realm is more probable than improbable. And it’s more likely this realm filled with spiritual entities would be created by an Intelligent Designer sans/universe and before the creation of earthly creatures. As human beings, despite our many follies, we are also extremely intelligent creatures. Our Read More ›

Quote of the Day

“Only the deepest of the corrupt pretend that the nature of a thing killed changes based on the sound of the syllables a mouth utters to name it.”   Edward H. Sisson, commenting on the use of the word “fetus” to describe a pre-born human.

Upright Biped’s summary on information systems in cell based life

UD participant Upright Biped (of Complexity Cafe U/D: Biosemiosis) has commented recently in the what is knowledge thread, replying to frequent objector CR by summarising key aspects of the role of information systems in observed cell based life. His remarks are well worth headlining: __________________ UB, 195: >>We can start by summarizing the core physical requirements of the system we are trying to explain: an autonomous self-replicator with open-ended potential (i.e. it can describe itself or any variation of itself). The system requires: 1) a sequence of representations in a medium of information. 2) a set of physical constraints to establish what is being represented. 3) a system of discontinuous association between representations and referents, based on spatial orientation (i.e. Read More ›

It’s not just science. Stanford lied for years to MBAs

A reader sends this: From EditorFrancis at Slashdot: 14 terabytes of “highly confidential” data about 5,120 financial aid applications over seven years were exposed in a breach at Stanford’s Graduate School of Business — proving that the school “misled thousands of applicants and donors about the way it distributes fellowship aid and financial assistance to its MBA students,” reports Poets&Quants. … Half the school’s students are awarded financial aid, and though Stanford always insisted it was awarded based only on need, the report concluded the school had been “lying to their faces” for more than a decade, also identifying evidece of “systemic biases against international students.” More. So the people who insist that there are systemic biases, like these, are Read More ›

More news from the decline: Revealing responses to creationist’s wrongful dismissal over soft dinosaur tissue discovery

From Colleen Flaherty at Inside Higher Education: California State University at Northridge has settled a lawsuit brought by a former employee who said he was fired for sharing news of an archaeological discovery that supported his young-Earth creationist beliefs. The university says it settled for $399,500 to avoid a protracted legal battle, but some scientists say the outcome has implications for how scientists critique creationist colleagues going forward. … Armitage published his findings in 2013 in Acta Histochemica, a peer-reviewed journal, leaving out his interpretation of the tissue’s age. If Armitage really found soft dinosaur tissue, his interpretation of their age would be irrelevant to others’ subsequent work. It would be irrelevant if he believed that dinosaurs were specially created Read More ›

Gunter Bechly: Decline of science? Imaged in a single paragraph

From Tyler O’Neil at PJ Media: Last month, Wikipedia removed the entry on German insect paleontologist Günter Bechly, seemingly due to his position on intelligent design (ID), the scientific movement considering evidence for design behind nature — a movement opposed to Darwinian evolution. While editors claimed Bechly was not “notable” enough to warrant an entry, others with fewer career accomplishments have long pages on Wikipedia, and Bechly has a distinguished career. … When Wikipedia editors discussed deleting Bechly’s page, the scientist posted his own credentials. He provided links to press, TV, and radio segments mentioning his work, exhibitions he designed, and a few articles from the BBC and Scientific American. “Add to that three described new insect orders, more than Read More ›

Genetic Literacy Project objects to the term “living fossils” as applied to humans

So do they think that we humans will evolve into separate species as a result of migration and founder effects? If not, what does “evolution” mean? From David Warmflash at the Genetic Literacy Project: The goblin shark, duck-billed platypus, lungfish, tadpole shrimp, cockroach, coelacanths and the horseshoe crab — these creatures are famous in the world of biology, because they look as though they stopped evolving long ago. To use a term introduced by Charles Darwin in 1859, they are “living fossils”. And to their ranks, some have added humans, based on the idea that technology and modern medicine has, for all intents and purposes, eliminated natural selection by allowing most infants to live to reproductive age and pass on their Read More ›

Scott Turner hopes for academic freedom for ID theorists

From J. Scott Turner in Purpose and Desire:What Makes Something “Alive” and Why Modern Darwinism Has Failed to Explain It, What modern Darwinism is asking us to admire is a husk of something once living, but with its vital core drained away as we have poked and prodded with our naughty thumbs until we are left with nothing but the beautiful shell. In short, the science of life has become disenchanted with life itself. That is the looming crisis I described in the Preface. (Kindle Locations 4263-4266). Sometimes, hope floats along on hidden reservoirs of the best tradition of classical liberalism, as in Stephen Jay Gould’s quiet supervision of a young Earth creationist, Kurt Wise, for his doctoral degree in Read More ›

Sabine Hossenfelder asks at her blog “How do you prove that Earth is older than 10,000 years?”

Hmmm. In practice, that depends in part on what people would consider evidence and whether or not they would be convinced by the evidence offered. Here: Planet Earth formed around 4.5 billion years ago. The first primitive forms of life appeared about 4 billion years ago. Natural selection did the rest, giving rise to species increasingly better adapted to their environment. Evidence, as they say, is overwhelming. Or is it? Imagine planet Earth began its existence a mere 10,000 years ago, with all fossil records in place and carbon-14 well into decaying. From there on, however, evolution proceeded as scientists tell us. How’d you prove this story wrong? You can’t. I know it hurts. But hang on there, band aid follows Read More ›